Accounting & Compliance

Payroll Management

Your monthly payroll run, done right: salary and variable-pay computation, statutory deductions, payslips and disbursement-ready outputs. Accurate, on time, and reconciled with your books.

Quick answer

Payroll management is the monthly run: computing salary, applying the four statutory deductions — provident fund, ESI, professional tax and TDS on salary — and producing payslips and a bank file. Every employer paying salaries needs it. Provident fund bites at 20 employees, ESI at 10, and salary TDS has no headcount threshold at all. We compute, deduct, reconcile to your books and can file the returns.

Applies to: Financial year 2026-27 (tax year 2026-27, assessment year 2027-28)Jurisdiction: India — central labour and income-tax law; professional tax is State law and variesSources checked: 2026-08-19

Monthly salary run Statutory deductions Disbursement-ready Expert-reviewed

Starts at

₹1,999/mo

Professional fees, government fees, late fees, penalties, payroll size, transaction volume, number of employees, entity type, filings and compliance complexity may vary.

Timeline

Monthly payroll cycle

Documents

Salary structure & inputs

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Monthly salary run

Statutory deductions

Disbursement-ready

Expert-reviewed

Pricing

Payroll management

Per employee per month, by headcount. Statutory contributions and salary disbursement are separate. Returns can be added.

Recommended

Payroll Run

Core monthly payroll

₹1,999/mo

+ GST | from

  • Salary computation
  • Statutory deductions
  • Payslips
  • Disbursement outputs
Start payroll

Payroll + Returns

Add statutory filings

Custom

By headcount

  • Payroll run
  • PF/ESI/PT returns
  • Salary TDS
  • Reconciliation with books
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Prices are professional fees and indicative. Government fees, stamp duty, DSC, PAN/TAN, state charges and third-party costs are extra and may change. A final engagement summary separates each component before payment.

Overview

What is Payroll Management?

Payroll management is the core monthly job of calculating what each employee should be paid — base salary, allowances, variable pay, reimbursements, and deductions for provident fund, ESI, professional tax and TDS — and producing accurate payslips and disbursement-ready outputs for your bank.

It sounds simple until you factor in changing salary structures, new joiners and exits mid-month, leave and attendance, and four different statutory deductions each with its own rules. Errors here directly hit employee trust and create downstream compliance problems.

We run your payroll accurately every month — correct computation, deductions and payslips — and keep it reconciled with your books, with statutory returns available as an add-on.

The statutory frame changed on 21 November 2025, when all four Labour Codes were brought into force. Provident fund now sits in Chapter III of the Code on Social Security, 2020 and is administered through the Employees' Provident Funds Scheme, 2026 (G.S.R. 525(E), 29 June 2026), which superseded the 1952 Scheme; the pension diversion is governed by the Employees' Pension Scheme, 2026. ESI sits in Chapter IV, with contribution rates now set by rule 19 of the Social Security (Central) Rules, 2026. Payment of wages and the deduction rules come from the Code on Wages, 2019. Salary TDS is section 392 of the Income-tax Act, 2025 — not section 393, which covers payments other than salary. The rates did not change; the instruments did.

Applicability, in one line each. Provident fund applies to an establishment with 20 or more employees, and ESI to one with 10 or more persons (20 in several centrally-governed categories) — and for both, the second proviso to section 2(26) of the Code counts employees above the wage ceiling too, so a twenty-person team all earning ₹80,000 is still covered. The PF wage ceiling is ₹15,000 a month (S.O. 2702(E), 29 May 2026) and the ESI wage limit is ₹21,000 a month (₹25,000 for a person with disability). Professional tax is State law, capped by Article 276(2) of the Constitution at ₹2,500 a year per person. Salary TDS has no headcount threshold. Registration comes first — see PF registration, ESI registration and professional tax registration.

A worked month, so the numbers are concrete. Assumptions: an employee on basic ₹10,000 + HRA ₹5,000 + special allowance ₹5,000 = ₹20,000 gross, at an establishment covered for both PF and ESI, in a State that levies professional tax; no overtime or bonus in the month. Under section 2(y) of the Code on Wages the excluded component (HRA, ₹5,000) is only 25% of total remuneration, so the 50% add-back proviso does not bite and PF wages are ₹15,000 — exactly at the ceiling. Deductions: provident fund ₹1,800 (12% of ₹15,000); ESI ₹150 (0.75% of the ₹20,000 ESI base, which includes HRA, rounded up); professional tax ₹200 (assumed — your State sets this); TDS nil, because the average rate under section 392(1) on an estimated annual salary of ₹2,40,000 is nil. Net pay ₹17,850, and total deductions of ₹2,150 sit comfortably inside the 50%-of-wages cap in section 18(3) of the Code on Wages.

What the same month costs you. On top of ₹20,000 gross: employer provident fund ₹1,800, of which ₹1,250 is diverted to the Pension Fund (8.33% of ₹15,000 under paragraph 4(1) of the EPS 2026) and ₹550 goes to the Provident Fund; employer ESI ₹650 (3.25% of ₹20,000, rounded up); plus EDLI and administrative charges, whose percentages are fixed by Central Government notification rather than stated in the Schemes — at the customary 0.50% each of PF wages (labelled assumption) that is about ₹75 apiece. Monthly cash cost roughly ₹22,600, or about ₹23,300 once you provision gratuity at 15/26 of a month's wages per year of service. The gap between the offer letter and the ledger is around 16%, and it belongs in your hiring plan.

For an employee above the limits the picture flips: at ₹75,000 gross there is no ESI, provident fund stays capped at the ₹15,000 base unless the employee and employer jointly opt in writing under paragraph 9(4) of the EPF Scheme 2026, and salary TDS becomes the largest line — computed at the average rate on estimated annual income, not by applying a slab to one month. The TDS on salary service covers the estimate, the declarations and the certificate, and the payroll compliance checklist sets out the full calendar.

Is it for you?

Who needs it — and who doesn't

Recommended if

  • Employers running monthly payroll
  • Startups formalising salary processing
  • Businesses with variable pay or frequent changes
  • Anyone wanting error-free, on-time payroll

May not be needed if

  • Businesses with no employees
  • Teams already on a reliable in-house payroll process

Benefits

Why it's worth doing right

Accurate every month

Correct salary, deductions and payslips keep your team paid right and trusting payroll.

Disbursement-ready

We produce bank-ready outputs so paying salaries is a click, not a calculation.

Reconciled with books

Payroll ties back to your accounting, so costs and liabilities are recorded correctly.

Eligibility

Eligibility & key conditions

  • You run monthly payroll for employees
  • You can share salary structures and inputs
  • You want accurate, on-time processing
  • Provident fund applies at 20 or more employees (Code on Social Security, First Schedule)
  • ESI applies at 10 or more persons — 20 in several centrally-governed categories
  • PF wage ceiling ₹15,000/month; ESI wage limit ₹21,000/month (₹25,000 for a person with disability)
  • Salary TDS applies with no headcount threshold, wherever tax is estimated to be payable
  • Professional tax applies only in States that levy it, capped at ₹2,500 per person per year

Documents

Documents required

What we need

  • Employee salary structures
  • Attendance and leave inputs
  • Variable pay/reimbursement details
  • New-joiner and exit details
  • PF/ESI/PT details (for deductions)

Process

A clear path from start to filed

1Configure
We set up salary structures and rules.
Output: Payroll config
Timeline: Week 1
2Collect inputs
You share attendance/variable inputs.
Output: Monthly inputs
Timeline: Monthly
3Process & review
We compute payroll; a professional reviews.
Output: Payroll + payslips
Timeline: Monthly
4Output & reconcile
We give disbursement files and post to books.
Output: Bank file + entries
Timeline: Monthly

Official filing

How the EPFO, ESIC and income-tax flow works

Payroll touches three portals every month and each has its own clock. Provident fund contributions, the pension share, the EDLI contribution and administrative charges are all payable within fifteen days of the close of the month, through the Electronic Challan-cum-Return — paragraphs 20(1) and 28(3) of the Employees' Provident Funds Scheme, 2026, and paragraph 4(1) of the Employees' Pension Scheme, 2026. ESI contributions are due, in the Corporation's own words, "within 15 days of the last day of the Calendar month in which the contributions fall due". Salary TDS is due within seven days from the end of the month under rule 218(2)(b) of the Income-tax Rules, 2026 — with one exception: tax deducted in March is payable by 30 April.

Two dates sit before the fifteenth and are missed constantly. Salaries for monthly-paid staff must be paid before the expiry of the seventh day of the succeeding month under section 17(1)(iv) of the Code on Wages, and a full-and-final settlement on removal, dismissal, retrenchment or resignation is due within two working days under section 17(2). Where you engage people through a contractor, the contractor must report wages and contributions to the principal employer within ten days of month end and the principal employer files the monthly abstract within twenty days (EPF Scheme 2026, paragraphs 27(3) and 27(4)).

Quarterly and annual filings run off the same data. The salary-TDS statement is now Form 138 under rule 219 of the Income-tax Rules, 2026 — the successor to Form 24Q — due 31 July, 31 October, 31 January and 31 May. The annual certificate for each employee is Form 130, the successor to Form 16, due by 15 June and generated from the portal rather than typed up (rule 215). We file these through TDS on salary and TDS return filing; the monthly PF and ESI returns are handled by PF return filing and ESI return filing.

Portal stages

  1. 1Freeze the month's inputs — attendance, joiners, exits, variable pay
  2. 2Compute wages under the Code on Wages definition, then the four deductions
  3. 3Professional review of the register before anything is released
  4. 4Payslips and the disbursement file to you; salaries paid by the 7th
  5. 5PF ECR and ESI contribution filed and paid by the 15th
  6. 6Salary TDS deposited within 7 days of month end (March: 30 April)
  7. 7Payroll entries and statutory liability accounts posted and reconciled

Costs

Fees & cost breakdown

Fees and cost breakdown for Payroll Management
Cost componentIndicative amount
Professional feePer-employee, by headcountFrom ₹1,999/mo
Statutory deductionsPF/ESI/PT/TDS; deposited separatelyAs applicable
Returns (optional)PF/ESI/PT/TDS returns if neededAdd-on

Deliverables

What you receive on completion

Monthly payroll computation
Employee payslips
Disbursement-ready bank file
Payroll entries reconciled to books

After this filing

What you need to stay compliant next

File the returns

Deductions made in payroll must be deposited and returned — we can handle PF/ESI/PT/TDS filings.

Keep it consistent

We reconcile payroll with accounting so liabilities and costs are recorded right.

Quarterly and annual TDS

The salary-TDS statement is Form 138 (formerly Form 24Q), due 31 July, 31 October, 31 January and 31 May. The annual certificate is Form 130 (formerly Form 16), due by 15 June and generated from the portal.

Onboarding and exits

Create the UAN and ESIC insurance number, upload new-member details within 15 days of month end, collect the Form 124 evidence of claims, and settle exits within two working days as the Code on Wages requires.

Provision for gratuity

Gratuity is not a monthly remittance, so it needs provisioning — 15 days' wages per completed year of service, or part in excess of six months, under section 53 of the Code on Social Security.

Avoid delays

Common mistakes & reasons for rejection

Common mistakes

  • Errors in salary or deduction computation
  • Missing mid-month joiners/exits
  • Not reconciling payroll with books
  • Deducting but not depositing/filing on time
  • Leaving high earners out of the headcount — s.2(26) counts employees above the wage ceiling for coverage
  • Applying a slab rate month by month for salary TDS instead of the average rate required by s.392(1)
  • Showing the employer's PF share as a payslip deduction — prohibited by para 21 of the EPF Scheme 2026
  • Treating HRA as outside ESI wages, or annual bonus as inside them — ESIC's position is the opposite
  • Not re-testing salary structures against the 50% wage rule in s.2(y) of the Code on Wages
  • Forgetting a second State's professional tax when you open an office there

Risks

Penalties & risks of getting it wrong

PF damages, per month

Paragraph 23 of the Employees' Provident Funds Scheme, 2026 charges damages on arrears at 0.25% per month for a default under two months, 0.50% per month for two to four months and 1% per month beyond four months — capped so damages never exceed the arrears. These are monthly rates: a four-month default is 4%, not 1%.

PF late-return fee

Paragraph 29(2) charges ₹500 per day for a delayed return, capped at that month's administrative charges. The cap makes a late return a bounded cost — an unfiled return is not, and it blocks the member's passbook.

ESI interest and damages

Contributions are due within 15 days of the last day of the month. Late payment attracts interest and damages under Chapter IV of the Code on Social Security, and a lapse can disrupt an employee's benefits mid-contribution-period.

Deducted but not deposited

Paragraph 22(3) of the EPF Scheme 2026 deems any sum deducted from wages to have been entrusted to the employer for the purpose of paying it over. Employee contributions and deducted TDS are held in trust — treated far more seriously than employer-share arrears.

Salary TDS default

Late deposit attracts interest, and a deductor who fails to deduct or pay may be treated as an assessee in default under sections 391(3) and 398(1) of the Income-tax Act, 2025. A late Form 138 attracts a late-filing fee that runs daily.

Late salary payment

Section 17(1)(iv) of the Code on Wages requires monthly wages to be paid before the expiry of the 7th of the following month, and section 17(2) requires a full-and-final settlement within two working days of exit. Both are statutory obligations, not conventions.

The employee is protected, you are not

Section 18(5) of the Code on Wages says that where the employer deducts but does not deposit, "such employee shall not be held responsible for such default of the employer". The liability stays entirely with you.

Recovery route

Quantify the month before you pay; pay the principal immediately, because damages escalate at the two- and four-month marks; file the late return anyway, since its fee is capped; prioritise deducted-but-not-deposited amounts; then reconcile member by member so employees' passbooks and tax credits actually update. Voluntary correction is a materially better position than one found on inspection — our payroll and HR compliance team handles this clean-up.

AI-powered assistance

AI does the heavy lifting. Experts make the call.

AI categorises transactions and flags gaps before your accountant reviews
Automated pre-checks reconcile books, payroll and tax data for mismatches
A plain-language monthly summary explains your numbers and what is due
Qualified accountants and compliance professionals review before filing
Files are kept in a secure, private document vault — never public links
You track your monthly cycle, filings and due dates live in your portal

AI assists with checks, drafting and explanations only. A qualified professional reviews every defined checkpoint and the final filing before submission. AI does not make consequential compliance decisions on its own.

Make payroll a non-event

We compute salaries and deductions, produce payslips and disbursement files, and reconcile with your books — accurate and on time, every month.

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Compare

Payroll Management vs HR Payroll Services

Payroll Management compared with HR Payroll Services
FactorPayroll ManagementHR Payroll Services
ScopeThe monthly payroll runPayroll + full statutory returns + HR
ReturnsOptional add-onIncluded
Best forCore payroll processingEnd-to-end employer compliance

Use cases

Built for how real businesses operate

Small team

Need: Accurate monthly pay

We suggest: Core payroll run with payslips.

Variable-pay business

Need: Handle complexity

We suggest: Managed payroll with reconciliation.

Why MyFinancialAdvisory

A more accountable way to stay compliant

AI-assisted checks on books, payroll and filings — reviewed by professionals
Verified where possible, reviewed by experts, tracked by you
One team for books, GST, payroll, PF/ESI, TDS and entity compliance
Secure document vault with role-based, time-limited access
Live tracking of your monthly cycle, filings and due dates in your portal
Transparent professional fees — government and statutory charges shown separately
Proactive reminders so monthly and statutory deadlines are never missed
Founder-friendly support in plain language, not accounting jargon

Quality & accountability

Reviewed by compliance experts

Every payroll management engagement is prepared with structured checks and signed off by qualified professionals before anything is filed — speed without sacrificing accuracy.

R

Reviewed by

Reviewed by MyFinancialAdvisory Compliance Team

Accounting, payroll & compliance review

Your books, payroll and filings are prepared with AI-assisted checks and reviewed by qualified accountants and compliance professionals before anything is filed. Business compliance, powered by AI — verified where possible, reviewed by experts, tracked by you.

Structured document checks

Documents and eligibility follow structured checks before expert review.

Expert-reviewed before filing

A qualified professional signs off every defined checkpoint.

Compliance-safe guidance

Advice mapped to current rules — no shortcuts, no guesswork.

Keep exploring

FAQs

Payroll Management — frequently asked questions

What is payroll management?

The monthly process of computing salaries, allowances, variable pay and statutory deductions, producing payslips and disbursement-ready outputs for your employees.

What deductions does payroll handle?

Provident fund, ESI, professional tax and TDS on salary, as applicable to each employee, computed per the current rules.

How is payroll priced?

Per employee per month, from ₹1,999/month (+ GST), by headcount. Statutory contributions and salary disbursement are separate; returns can be added.

Do you disburse salaries?

We produce disbursement-ready bank files; the actual transfer is done by you (or your bank). We don't move money on your behalf.

Can you file the statutory returns too?

Yes — PF, ESI, professional tax and salary-TDS returns are available as an add-on, so deductions are deposited and reported on time.

Will payroll reconcile with my accounting?

Yes — we post payroll entries to your books so salary costs and statutory liabilities are recorded correctly and reconcile.

How do you handle mid-month joiners and exits?

We pro-rate pay and deductions for joiners and process full-and-final for exits, so payroll stays accurate.

Is the payroll reviewed before finalising?

Yes — AI-assisted checks flag anomalies and a professional reviews the run before payslips and outputs are released.

Are the four Labour Codes actually in force?

Yes. All four commenced on 21 November 2025 — the Code on Social Security by S.O. 5319(E) and the Code on Wages by S.O. 5322(E). The transition is not finished, though: the Social Security (Central) Rules, 2026 came only on 8 May 2026, the replacement ESI (General) Regulations were still in draft in July 2026, and State rules are arriving unevenly. Contribution rates and the PF wage ceiling did not change.

Did PF and ESI contribution rates change?

No. The Employees' Provident Funds Scheme, 2026 re-enacts 12% from the employer and 12% from the employee, with 8.33% of wages up to the ceiling going to the Pension Fund. Rule 19 of the Social Security (Central) Rules, 2026 re-enacts ESI at 3.25% employer and 0.75% employee. What changed is the instrument you cite, not the arithmetic.

When do PF, ESI and salary TDS have to be paid?

PF contributions and charges within 15 days of the close of the month (EPF Scheme 2026, paragraphs 20 and 28); ESI within 15 days of the last day of the month; salary TDS within 7 days from the end of the month, except March, where the deposit date is 30 April (Income-tax Rules, 2026, rule 218). Salaries themselves are due before the expiry of the 7th.

Is it still Form 24Q and Form 16?

For FY 2025-26 and earlier, yes. For FY 2026-27 the Income-tax Rules, 2026 renumbered them: the quarterly salary-TDS statement is Form 138 (rule 219) and the annual certificate is Form 130 (rule 215), due by 15 June. Form 130 must be generated from the portal — a hand-made certificate is not a certificate.

What is the 50% wage rule and does it affect my payroll?

Section 2(y) of the Code on Wages excludes HRA, overtime, commission and similar components from 'wages' — but if those excluded components exceed half of total remuneration, the excess is added back into wages. Allowance-heavy structures therefore no longer produce a low PF and gratuity base. If you have not re-tested your structure since November 2025, that is the first thing to do.

Do you handle multi-State professional tax?

Yes. Professional tax follows where the employee works, not where your registered office sits, so a second State usually means a second registration and a second return cycle. The slabs are State law; the only national rule is the Article 276(2) cap of ₹2,500 per person per year.

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